BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F11SP1|AL427512
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1656 0.0
>3x_Contig1804
Length = 51183
Score = 1656 bits (834), Expect = 0.0
Identities = 907/924 (98%), Gaps = 7/924 (0%)
Strand = Plus / Minus
Query: 1 gatcggctagggcgtmtgctacaatttcacctttctgagtcagagttccttgaaatacaa 60
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5722 gatcggctagggcgtctgctacaatttcacctttctgagttagagttccttgaaatacct 5663
Query: 61 gtcggatagaagaatctgtaattagtgcggcgtattatttggcaacagttcctcagcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5662 gtcggatagaagaatctgtaattagtgcggcgtattatttggcaacagttcctcagcttt 5603
Query: 121 aaagttaatttgaagcgagatttcattttggttagagtaaacaattcagactcaatatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 aaagttaatttgaagcgagatttcattttggttagagtaaacaattcagactcaatatga 5543
Query: 181 aatttggtaagacgttcccaaatcatcaagttccagaatggtcccatgaatacgtgaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 aatttggtaagacgttcccaaatcatcaagttccagaatggtcccatgaatacgtgaact 5483
Query: 241 ataaatcactcaagaagctaatcaaagaaatagtggctgttcaagatcaattatacaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 ataaatcactcaagaagctaatcaaagaaatagtggctgttcaagatcaattatacaagc 5423
Query: 301 aggagcatcgtgtcgatgggaaagatagagaaaatacgtcagtttcaccaccgtcgaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5422 aggagcatcgtgtcgatgggaaagatagagaaaatacgtcagtttcaccaccgtcgaaac 5363
Query: 361 ctatggatgtcagtacaagaaccaaagattatctgaatcatccggaagtcaaaaccttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5362 ctatggatgtcagtacaagaaccaaagattatctgaatcatccggaagtcaaaaccttac 5303
Query: 421 tggcaaaatttttctttgcgttagacgccgatattcagaaggttgactcattttataatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5302 tggcaaaatttttctttgcgttagacgccgatattcagaaggttgactcattttataatc 5243
Query: 481 aacaatttttggaatatgatcgtcggttgaggaagttgttatcatcggctcagttcactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5242 aacaatttttggaatatgatcgtcggttgaggaagttgttatcatcggctcagttcactg 5183
Query: 541 aattcaaccgtgctttgatgtatggagctgcaaatggtaacagtggcctaaatcacactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5182 aattcaaccgtgctttgatgtatggagctgcaaatggtaacagtggcctaaatcacactg 5123
Query: 601 ctgggaatggtaatgggtgcctatctcagcccatgccaacgcgctanaatcgncatcaat 660
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 5122 ctgggaatggtaatgggtgcctatctcagcccatgccaacgcgctataatcgtcatcaat 5063
Query: 661 cattgacacaaaatggtcatcctggattccatgtgaacccagattcagtaaatcacctca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5062 cattgacacaaaatggtcatcctggattccatgtgaacccagattcagtaaatcacctca 5003
Query: 721 tgctatcctcaaacaaagccactgaagaagcagaagattggagcgaagttttagcaattn 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5002 tgctatcctcaaacaaagccactgaagaagcagaagattggagcgaagttttagcaatt- 4944
Query: 781 ctaattgaactaaggnccgcattttagaaaatttgaagtggtacggtgaacntnaacaaa 840
||||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 4943 ctaattgaactaaggt-cgcattttag-aaatttgaagtggtacggtgaac-ttaacaaa 4887
Query: 841 cgagccttcagaaaaatcttaaaaaasattggacaaaatagttggtacttcacaaacagg 900
|||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 4886 cgagccttcagaaaaatcttaaaaaa-attggacaaaaaagttggtacttcac-aacagg 4829
Query: 901 aaaccatccacgcattctagaatt 924
||||||| |||||| |||||||||
Sbjct: 4828 aaaccat-cacgcaatctagaatt 4806
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6634
Number of Sequences: 1807
Number of extensions: 6634
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)